Agriculture Reference
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Mochida K, Yoshida T, Sakurai T, Ogihara Y, Shinozaki K (2009b) TriFLDB: a database of clus-
tered full-length coding sequences from Triticeae with applications to comparative grass ge-
nomics. Plant Physiol 150:1135-1146
Mochida K, Yoshida T, Sakurai T, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS (2009c) In silico
analysis of transcription factor repertoire and prediction of stress responsive transcription fac-
tors in soybean. DNA Res 16:353-369
Mochida K, Yoshida T, Sakurai T, Yamaguchi-Shinozaki K, Shinozaki K, Tran LS (2010) Legu-
meTFDB: an integrative database of Glycine max, Lotus japonicus and Medicago truncatula
transcription factors. Bioinformatics 26:290-291
Moco S, Bino RJ, Vorst O, Verhoeven HA, de Groot J, van Beek TA et al (2006) A liquid chroma-
tography-mass spectrometry-based metabolome database for tomato. Plant Physiol 141:1205-
1218
Mori M, Tomita C, Sugimoto K, Hasegawa M, Hayashi N, Dubouzet JG et al (2007) Isolation and
molecular characterization of a Spotted leaf 18 mutant by modified activation-tagging in rice.
Plant Mol Biol 63:847-860
Morreel K, Goeminne G, Storme V, Sterck L, Ralph J, Coppieters W et al (2006) Genetical me-
tabolomics of flavonoid biosynthesis in Populus: a case study. Plant J 47:224-237
Mueller LA, Zhang P, Rhee SY (2003) AraCyc: a biochemical pathway database for Arabidopsis.
Plant Physiol 132:453-460
Mueller LA, Solow TH, Taylor N, Skwarecki B, Buels R, Binns J et al (2005) The SOL Ge-
nomics Network: a comparative resource for Solanaceae biology and beyond. Plant Physiol
138:1310-1317
Mullins E, Milbourne D, Petti C, Doyle-Prestwich BM, Meade C (2006) Potato in the age of bio-
technology. Trends Plant Sci 11:254-260
Nakamura H, Hakata M, Amano K, Miyao A, Toki N, Kajikawa M et al (2007) A genome-wide
gain-of function analysis of rice genes using the FOX-hunting system. Plant Mol Biol 65:357-
371
Nakano M, Nobuta K, Vemaraju K, Tej SS, Skogen JW, Meyers BC (2006) Plant MPSS databases:
signature-based transcriptional resources for analyses of mRNA and small RNA. Nucleic Ac-
ids Re s 34:D731-D735
Nanjo T, Sakurai T, Totoki Y, Toyoda A, Nishiguchi M, Kado D et al (2007) Functional annotation
of 19,841 Populus nigra full length enriched cDNA clones. BMC Genomics 8:448
Neale DB, Ingvarsson PK (2008) Population, quantitative and comparative genomics of adapta-
tion in forest trees. Curr Opin Plant Biol 11:149-155
Newton RP, Brenton AG, Smith CJ, Dudley E (2004) Plant proteome analysis by mass spectrom-
etry: principles, problems, pitfalls and recent developments. Phytochemistry 65:1449-1485
Nobuta K, Venu RC, Lu C, Belo A, Vemaraju K, Kulkarni K et al (2007) An expression atlas of
rice mRNAs and small RNAs. Nat Biotechnol 25:473-477
Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, Accerbi M et al (2008) Distinct size distribu-
tion of endogeneous siRNAs in maize: evidence from deep sequencing in the mop1-1 mutant.
Proc Natl Acad Sci USA 105:14958-14963
Nuhse TS, Stensballe A, Jensen ON, Peck SC (2004) Phosphoproteomics of the Arabidopsis plas-
ma membrane and a new phosphorylation site database. Plant Cell 16:2394-2405
Nuhse TS, Bottrill AR, Jones AM, Peck SC (2007) Quantitative phosphoproteomic analysis of
plasma membrane proteins reveals regulatory mechanisms of plant innate immune responses.
Plant J 51:931-940
Obayashi T, Kinoshita K, Nakai K, Shibaoka M, Hayashi S, Saeki M et al (2007) ATTED-II: a
database of co-expressed genes and cis elements for identifying co-regulated gene groups in
Arabidopsis. Nucleic Acids Res 35:D863-D869
Obayashi T, Hayashi S, Saeki M, Ohta H, Kinoshita K (2009) ATTED-II provides coexpressed
gene networks for Arabidopsis. Nucleic Acids Res 37:D987-D991
O'Brien EA, Zhang Y, Wang E, Marie V, Badejoko W, Lang BF, Burger G (2009) GOBASE: an
organelle genome database. Nucleic Acids Res 37:D946-D950
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