Biomedical Engineering Reference
In-Depth Information
Konevega AL, Fischer N, Semenkov YP et al (2007) Spontaneous reverse movement of mRNA-bound
tRNA through the ribosome. Nat Struct Mol Biol 14:318-324
Korostelev A, Asahara H, Lancaster L et al (2008) Crystal structure of a translation termination
complex formed with release factor RF2. Proc Natl Acad Sci U S A 105:19684-19689
Kuhlenkoetter S, Wintermeyer W, Rodnina MV (2011) Different substrate-dependent transition
states in the active site of the ribosome. Nature 476:351-354
Lancaster L, Kiel MC, Kaji A et al (2002) Orientation of ribosome recycling factor in the ribosome
from directed hydroxyl radical probing. Cell 111:129-140
Lancaster LE, Savelsbergh A, Kleanthous C et al (2008) Colicin E3 cleavage of 16S rRNA impairs
decoding and accelerates tRNA translocation on
Escherichia coli
ribosomes. Mol Microbiol
69:390-401
Laurberg M, Asahara H, Korostelev A et al (2008) Structural basis for translation termination on
the 70S ribosome. Nature 454:852-857
Moazed D, Noller HF (1989) Intermediate states in the movement of transfer RNA in the ribo-
some. Nature 342:142-148
Mora L, Heurgue-Hamard V, Champ S et al (2003a) The essential role of the invariant GGQ motif
in the function and stability in vivo of bacterial release factors RF1 and RF2. Mol Microbiol
47:267-275
Mora L, Zavialov A, Ehrenberg M et al (2003b) Stop codon recognition and interactions with
peptide release factor RF3 of truncated and chimeric RF1 and RF2 from Escherichia coli. Mol
Microbiol 50:1467-1476
Munro JB, Wasserman MR, Altman RB et al (2010) Correlated conformational events in EF-G and
the ribosome regulate translocation. Nat Struct Mol Biol 17:1470-1477
Nechifor R, Murataliev M, Wilson KS (2007) Functional interactions between the G¢ subdomain
of bacterial translation factor EF-G and ribosomal protein L7/L12. J Biol Chem 282:
36998-37005
Nissen P, Hansen J, Ban N et al (2000) The structural basis of ribosome activity in peptide bond
synthesis. Science 289:920-930
Pan D, Kirillov SV, Cooperman BS (2007) Kinetically competent intermediates in the transloca-
tion step of protein synthesis. Mol Cell 25:519-529
Peske F, Savelsbergh A, Katunin VI et al (2004) Conformational changes of the small ribosomal
subunit during elongation factor G-dependent tRNA-mRNA translocation. J Mol Biol
343:1183-1194
Peske F, Rodnina MV, Wintermeyer W (2005) Sequence of steps in ribosome recycling as defined
by kinetic analysis. Mol Cell 18:403-412
Polacek N, Gomez MJ, Ito K et al (2003) The critical role of the universally conserved A2602 of
23S ribosomal RNA in the release of the nascent peptide during translation termination. Mol
Cell 11:103-112
Rangelov MA, Vayssilov GN, Yomtova VM et al (2006) The syn-oriented 2-OH provides a favor-
able proton transfer geometry in 1,2-diol monoester aminolysis: implications for the ribosome
mechanism. J Am Chem Soc 128:4964-4965
Robertson JM, Wintermeyer W (1981) Effect of translocation on topology and conformation of
anticodon and D loops of tRNAPhe. J Mol Biol 151:57-59
Robertson JM, Paulsen H, Wintermeyer W (1986) Pre-steady-state kinetics of ribosomal transloca-
tion. J Mol Biol 192:351-360
Rodnina MV, Wintermeyer W (2001) Fidelity of aminoacyl-tRNA selection on the ribosome:
kinetic and structural mechanisms. Annu Rev Biochem 70:415-435
Rodnina MV, Savelsbergh A, Katunin VI et al (1997) Hydrolysis of GTP by elongation factor G
drives tRNA movement on the ribosome. Nature 385:37-41
Rodnina MV, Beringer M, Wintermeyer W (2006) Mechanism of peptide bond formation on the
ribosome. Q Rev Biophys 39:203-225
Satterthwait AC, Jencks WP (1974) The mechanism of the aminolysis of acetate esters. J Am
Chem Soc 96:7018-7031
Savelsbergh A, Matassova NB, Rodnina MV et al (2000) Role of domains 4 and 5 in elongation
factor G functions on the ribosome. J Mol Biol 300:951-961
Search WWH ::
Custom Search