Biomedical Engineering Reference
In-Depth Information
McCutcheon JP, Agrawal RK, Philips SM, Grassucci RA, Gerchman SE, Clemons WM Jr,
Ramakrishnan V, Frank J (1999) Location of translational initiation factor IF3 on the small
ribosomal subunit. Proc Natl Acad Sci U S A 96(8):4301-4306
Myasnikov AG, Marzi S, Simonetti A, Giuliodori AM, Gualerzi CO, Yusupova G, Yusupov M,
Klaholz BP (2005) Conformational transition of initiation factor 2 from the GTP- to GDP-
bound state visualized on the ribosome. Nat Struct Mol Biol 12(12):1145-1149. doi: nsmb1012
[pii] 10.1038/nsmb1012
Passmore LA, Schmeing TM, Maag D, Applefield DJ, Acker MG, Algire MA, Lorsch JR,
Ramakrishnan V (2007) The eukaryotic translation initiation factors eIF1 and eIF1A induce an
open conformation of the 40S ribosome. Mol Cell 26(1):41-50. doi : S1097-2765(07)00188-8
[pii] 10.1016/j.molcel.2007.03.018
Pilipenko EV, Pestova TV, Kolupaeva VG, Khitrina EV, Poperechnaya AN, Agol VI, Hellen CU
(2000) A cell cycle-dependent protein serves as a template-specific translation initiation factor.
Genes Dev 14(16):2028-2045
Pioletti M, Schlunzen F, Harms J, Zarivach R, Gluhmann M, Avila H, Bashan A, Bartels H,
Auerbach T, Jacobi C, Hartsch T, Yonath A, Franceschi F (2001) Crystal structures of
complexes of the small ribosomal subunit with tetracycline, edeine and IF3. EMBO J 20(8):
1829-1839. doi: 10.1093/emboj/20.8.1829
Pisarev AV, Kolupaeva VG, Pisareva VP, Merrick WC, Hellen CU, Pestova TV (2006) Specific
functional interactions of nucleotides at key −3 and +4 positions flanking the initiation codon
with components of the mammalian 48S translation initiation complex. Genes Dev 20(5):
624-636. doi: 20/5/624 [pii] 10.1101/gad.1397906
Pisarev AV, Unbehaun A, Hellen CU, Pestova TV (2007) Assembly and analysis of eukaryotic
translation initiation complexes. Methods Enzymol 430:147-177. doi : S0076-6879(07)30007-4
[pii] 10.1016/S0076-6879(07)30007-4
Pisarev AV, Kolupaeva VG, Yusupov MM, Hellen CU, Pestova TV (2008) Ribosomal position and
contacts of mRNA in eukaryotic translation initiation complexes. EMBO J 27(11):1609-1621.
doi: emboj200890 [pii] 10.1038/emboj.2008.90
Pisareva VP, Pisarev AV, Komar AA, Hellen CU, Pestova TV (2008) Translation initiation on
mammalian mRNAs with structured 5¢UTRs requires DExH-box protein DHX29. Cell
135(7):1237-1250. doi: S0092-8674(08)01374-3 [pii] 10.1016/j.cell.2008.10.037
Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S
ribosomal subunit in complex with initiation factor 1. Science 331(6018):730-736.
doi: science.1198308 [pii] 10.1126/science.1198308
Schmeing TM, Ramakrishnan V (2009) What recent ribosome structures have revealed about the
mechanism of translation. Nature 461(7268):1234-1242. doi: nature08403 [pii] 10.1038/
nature08403
Selmer M, Dunham CM, Murphy FVt, Weixlbaumer A, Petry S, Kelley AC, Weir JR, Ramakrishnan
V (2006) Structure of the 70S ribosome complexed with mRNA and tRNA. Science
313(5795):1935-1942. doi: 1131127 [pii] 10.1126/science.1131127
Siridechadilok B, Fraser CS, Hall RJ, Doudna JA, Nogales E (2005) Structural roles for human
translation factor eIF3 in initiation of protein synthesis. Science 310(5753):1513-1515.
doi: 310/5753/1513 [pii] 10.1126/science.1118977
Sizova DV, Kolupaeva VG, Pestova TV, Shatsky IN, Hellen CU (1998) Specific interaction of
eukaryotic translation initiation factor 3 with the 5¢ nontranslated regions of hepatitis C virus
and classical swine fever virus RNAs. J Virol 72(6):4775-4782
Spiegel PC, Ermolenko DN, Noller HF (2007) Elongation factor G stabilizes the hybrid-state confor-
mation of the 70S ribosome. RNA 13(9):1473-1482. doi: rna.601507 [pii] 10.1261/rna.601507
Stevenson AL, Juanes PP, McCarthy JE (2010) Elucidating mechanistic principles underpinning
eukaryotic translation initiation using quantitative fluorescence methods. Biochem Soc Trans
38(6):1587-1592. doi: BST0381587 [pii] 10.1042/BST0381587
Taylor DJ, Nilsson J, Merrill AR, Andersen GR, Nissen P, Frank J (2007) Structures of modified
eEF2 80S ribosome complexes reveal the role of GTP hydrolysis in translocation. EMBO J
26(9):2421-2431. doi: 7601677 [pii] 10.1038/sj.emboj.7601677
Search WWH ::




Custom Search