Agriculture Reference
In-Depth Information
from germinating seeds which normally stimulate pathogen propagules responsible
for damping-off to germinate or stimulate zoospore attraction. This mechanism has
been recorded for control of
Pythium ultimum
by
Enterobacter cloacae
on a number
of plants (Kageyama & Nelson, 2003),
Pythium aphanidermatum
by
Burkholderia
cepacia
on pea (Heungens & Parke, 2000) and for
P. ultimum
and/or
Rhizopus oryzae
by
Trichoderma
spp. on cotton (Howell, 2002). However, the most commonly cited
example for competition, particularly in soil and the rhizosphere, involves that for iron,
as often its low bioavailability particularly in high pH soils is a factor limiting growth
of microorganisms. Consequently, most microorganisms produce iron-chelating com-
pounds termed siderophores to competitively acquire ferric iron. Many siderophores
produced by bacteria have a very high affi nity for ferric iron, and their release sequesters
the limited supply of iron making it unavailable to pathogenic fungi, thereby restricting
their growth (Loper & Henkels, 1999). Thus, the pyoverdine siderophores produced by
numerous
Pseudomonas
species have been shown to be involved in the control of both
Pythium
and
Fusarium
species (Loper & Buyer, 1991; Duijff
et al
., 1993). Some bacte-
rial BCAs can even utilise the siderophores produced by other bacteria enhancing their
ability to colonise the rhizosphere and potentially their biocontrol activity (Loper &
Henkels, 1999).
3.2.2
Production of antibiotics
Production of antibiotics and inhibitory metabolites by microorganisms has been well
established as a mode of action. Microorganisms commonly produce such metabo-
lites during the course of their growth and only if production at the site of biocontrol
is confi rmed, or activity implied by use of either non-producing or over-producing
mutants, or reporter strains, can a role in biocontrol be assured. Against this background,
compounds such as amphisin, 2,4-diacetylphloroglucinol, hydrogen cyanide, oomycin A,
phenazine, pyoluteorin, pyrrolnitrin, tensin, tropolone and cyclic lipopolysaccharides
produced by
Pseudomonas
spp. (Défago, 1993; Nielsen
et al
., 2002; Raaijmakers
et al
.,
2002; de Souza
et al
., 2003; Nielsen & Sørensen, 2003) and gramicidin S, oligomycin A,
kanosamine, iturin, zwittermycin A and xanthobaccin produced by
Bacillus
,
Streptomyces
and
Stenotrophomonas
spp. (Milner
et al
., 1995, 1996; Hashidoko
et al
., 1999; Kim
et al
.,
1999; Nakayama
et al
., 1999; Edwards & Seddon, 2001; Romero
et al
., 2007) have been
identifi ed to have a role in disease biocontrol. The regulation of many of these bacterial
antibiotics has been explored and involvement of regulatory genes, and sigma factors, and
key signal molecules has been found. These include GacA/GacS or GrrA/Grrs, RpoD,
RpoN, RpoS, prsA, and
N
-acyl homoserine lactone derivatives (Pierson
et al
., 1998;
Chancey
et al
. 1999; Bloemberg & Lugtenberg, 2001; Haas & Keel, 2003; Chin-A-Woeng
et al
., 2005; Péchy-Tarr
et al
., 2005) as well as positive autoregulation systems (Schnider-
Keel
et al
., 2000; Brodhagen
et al
., 2004). Production is also infl uenced by nutrient
availability, plant type and age, environmental conditions, microorganisms present
including other BCAs and the pathogen itself, which all involve complex signalling path-
ways (Molina
et al
., 2003; Duffy
et al
., 2004; Maurhofer
et al
., 2004; Morello
et al
.,
2004; Compant
et al
., 2005b) and so the spectrum of antibiotic production by any of the
strains of BCA may differ depending on the situation under consideration. Interestingly,
interference with signalling processes controlling antibiotic production may actually be