Biology Reference
In-Depth Information
Gilbert, N., Lutz-Prigge, S., and Moran, J. V. (2002). Genomic deletions created upon LINE-1
retrotransposition. Cell 110, 315-325.
Gilbert, N., Lutz, S., Morrish, T. A., and Moran, J. V. (2005). Multiple fates of L1 retrotransposition
intermediates in cultured human cells. Mol. Cell. Biol. 25, 7780-7795.
Goodier, J. L., Ostertag, E. M., and Kazazian, H. H., Jr. (2000). Transduction of 3
0
-flanking sequences
is common in L1 retrotransposition. Hum. Mol. Genet. 9, 653-657.
Goodier, J. L., Ostertag, E. M., Engleka, K. A., Seleme, M. C., and Kazazian, H. H., Jr. (2004). A
potential role for the nucleolus in L1 retrotransposition. Hum. Mol. Genet. 13, 1041-1048.
Goodier, J. L., Zhang, L., Vetter, M. R., and Kazazian, H. H., Jr. (2007). LINE-1 ORF1 protein
localizes in stress granules with other RNA-binding proteins, including components of RNA
interference RNA-induced silencing complex.
Mol. Cell. Biol. 27, 6469-6483.
Han, J. S., and Boeke, J. D. (2004). A highly active synthetic mammalian retrotransposon.
Nature
429, 314-318.
Han, J. S., Szak, S. T., and Boeke, J. D. (2004). Transcriptional disruption by the L1 retrotransposon
and implications for mammalian transcriptomes.
Nature 429, 268-274.
Han, K., Sen, S. K., Wang, J., Callinan, P. A., Lee, J., Cordaux, R., Liang, P., and Batzer, M. A.
(2005). Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and
chimpanzee lineages.
Nucleic Acids Res. 33, 4040-4052.
Han, K., Lee, J., Meyer, T. J., Wang, J., Sen, S. K., Srikanta, D., Liang, P., and Batzer, M. A. (2007).
Alu recombination-mediated structural deletions in the chimpanzee genome.
PLoS Genet. 3,
1939-1949.
Han, K., Lee, J., Meyer, T. J., Remedios, P., Goodwin, L., and Batzer, M. A. (2008). L1 recombination-
associated deletions generate human genomic variation.
Proc. Natl. Acad. Sci. USA 105,
19366-19371.
Hancks, D. C., Ewing, A. D., Chen, J. E., Tokunaga, K., and Kazazian, H. H., Jr. (2009). Exon-
trapping mediated by the human retrotransposon SVA. Genome Res. 19, 1983-1991.
Hata, K., and Sakaki, Y. (1997). Identification of critical CpG sites for repression of L1 transcription
by DNA methylation. Gene 189, 227-234.
Hedges, D. J., and Deininger, P. L. (2007). Inviting instability: Transposable elements, double-strand
breaks, and the maintenance of genome integrity. Mutat. Res. 616, 46-59.
Hellmann-Blumberg, U., Hintz, M. F., Gatewood, J. M., and Schmid, C. W. (1993). Developmental
differences in methylation of human Alu repeats. Mol. Cell. Biol. 13, 4523-4530.
Herbig, U., Ferreira, M., Condel, L., Carey, D., and Sedivy, J. M. (2006). Cellular senescence in aging
primates. Science 311, 1257.
Huang, C. R., Schneider, A. M., Lu, Y., Niranjan, T., Shen, P., Robinson, M. A., Steranka, J. P.,
Valle, D., Civin, C. I., Wang, T., et al. (2010). Mobile interspersed repeats are major structural
variants in the human genome. Cell 141, 1171-1182.
Hulme, A. E., Bogerd, H. P., Cullen, B. R., and Moran, J. V. (2007). Selective inhibition of Alu
retrotransposition by APOBEC3G.
Gene 390, 199-205.
Iskow, R. C., McCabe, M. T., Mills, R. E., Torene, S., Pittard, W. S., Neuwald, A. F., Van Meir, E. G.,
Vertino, P. M., and Devine, S. E. (2010). Natural mutagenesis of human genomes by endogenous
retrotransposons.
Cell 141, 1253-1261.
Jasin, M. (2000). Chromosome breaks and genomic instability.
Cancer Invest. 18, 78-86.
Jeyapalan, J. C., Ferreira, M., Sedivy, J. M., and Herbig, U. (2007). Accumulation of senescent cells
in mitotic tissue of aging primates.
Mech. Ageing Dev. 128, 36-44.
Jurka, J. (1997). Sequence patterns indicate an enzymatic involvement in integration of mammalian
retroposons.
Proc. Natl. Acad. Sci. USA 94, 1872-1877.
Jurka, J., Klonowski, P., Dagman, V., and Pelton, P. (1996). CENSOR-a program for identification
and elimination of repetitive elements from DNA sequences.
Comput. Chem. 20, 119-121.
