Biology Reference
In-Depth Information
34.
Villas-Boas, S. G., J. F. Moxley, M. Akesson, et al. High-throughput metabolic
state analysis: the missing link in integrated functional genomics of yeasts.
Biochemical Journal , 388(Pt 2):669-77, 2005.
35.
Sanford, K., G. Whited and G. Chotani. Genomics to fluxomics and
physiomics—pathway engineering. Current Opinion in Microbiology , 5(3):
318-22, 2002.
36.
Krömer, J. O., O. Sorgenfrei, K. Klopprogge, et al. In-depth profiling of
lysine-producing Corynebacterium glutamicum by combined analysis of
the transcriptome, metabolome, and fluxome. Journal of Bacteriology ,
186(6):1769-84, 2004.
37.
Lee, J. H., B. U. Lee and H. S. Kim. Global analyses of transcriptomes and
proteomes of a parent strain and an L -threonine-overproducing mutant
strain. Journal of Bacteriology , 185(18):5442-51, 2003.
38.
Hong, S. H., J. S. Kim, S. Y. Lee, et al. The genome sequence of the
capnophilic rumen bacterium Mannheimia succiniciproducens .
Nature
Biotechnology , 22(10):1275-81, 2004.
39.
Lee, P.C., S. Y. Lee, S. H. Hong, et al. Isolation and characterization of
a new succinic acid-producing bacterium, Mannheimia succiniciproducens
MBEL55E, from bovine rumen. Applied Microbiology and Biotechnology ,
58:663-8, 2002.
40.
Lee, S. Y. and E. T. Papoutsakis. Metabolic Engineering . Marcel Dekker,
New York, 1999.
41.
Ishii, N., M. Robert, Y. Nakayama, et al. Toward large-scale modeling of the
microbial cell for computer simulation. Journal of Biotechnology , 113:281-94,
2004.
42.
Schomburg, I., A. Chang and D. Schomburg. BRENDA, enzyme data and
metabolic information. Nucleic Acids Research , 30(1):47-9, 2002.
43.
Sivakumaran, S., S. Hariharaputran, J. Mishra, et al. The Database of
Quantitative Cellular Signaling: management and analysis of chemical
kinetic models of signaling networks. Bioinformatics , 19(3):408-15, 2003.
44.
Mendes, P. GEPASI: a software package for modeling the dynamics, steady
states and control of biochemical and other systems. Computer Applications
in the Biosciences , 9(5), 563-71, 1993.
45.
Goryanin, I., T. C. Hodgman and E. Selkov. Mathematical simulation
and analysis of cellular metabolism and regulation. Bioinformatics , 15(9):
749-58, 1999.
46.
Tomita, M., K. Hashimoto, K. Takahashi, et al. E-Cell: software environment
for whole-cell simulation. Bioinformatics , 15(1):72-84, 1999.
47.
Sauro, H. M. SCAMP: a general-purpose simulator and metabolic control
analysis program. Computer Applications in the Biosciences , 9(4):441-50, 1993.
48.
Schaff, J., C. C. Fink, B. Slepchenko, et al. A general computational
framework for modeling cellular structure and function. Biophysical Journal ,
73(3): 1135-46, 1997.
49.
Morton-Firth, C. J. and D. Bray. Predicting temporal fluctuations in an intra-
cellular signalling pathway. Journal of Theoretical Biology , 192(1):117-28, 1998.
50.
Kierzek, A. M. STOCKS: STOChastic Kinetic Simulations of biochemical
systems with Gillespie algorithm. Bioinformatics , 18(3):470-81, 2002.
51.
You, L, A. Hoonlor and J. Yin. Modeling biological systems using Dynetica-
a simulator of dynamic networks. Bioinformatics , 19(3):435-6, 2003.
Search WWH ::




Custom Search