Indigenous Lactic Acid Bacteria in Fish and Crustaceans - Aquaculture Nutrition: Gut Health, Probiotics and Prebiotics - page 131

Table 6.1 LAB identified from the GI tract of salmonids.

Species LAB species isolated Methodology Reference

C. maltaromaticum , a C.
alterfunitum -like and C.
divergens

Rainbow trout
( Oncorhynchus mykiss )

Culture based Spanggaard et al .

(2001)

Carnobacterium spp. and
Streptococcus spp.

Culture based Spanggaard et al .

(2000)

Carnobacterium spp., C.
divergens and C.
maltaromaticum

Culture based,
clone libraries
and DGGE

Kim et al . (2007)

Lactobacillus spp. and
Lactococcus spp.

Culture based Heikkinen et al . (2006)

Carnobacterium spp. and C.
maltaromaticum a

Culture based,
DGGE and FISH

Huber et al . (2004)

C. maltaromaticum a

Culture based Pond et al . (2006)

Enterococcus spp. Culture based Dimitroglou et al .

(2009)

C. maltaromaticum , E. faecalis ,
Leu. citreum and B. adolescentis

Clone libraries
and qPCR

Mansfield et al . (2010)

Lc. lactis TTGE Navarrete et al . (2010)

Lb. aviaries , Lactobacillus sp.,
uncultured Streptococcus sp.
and Str. iniae

TTGE Navarrete et al . (2012)

E. faecium , E . faecalis , E . hirae ,
E . mundtii , Leu . mesenteroides
subsp. mesenteroides , C .
maltaromaticum , Lc . lactis , Lb .
sakei , Lb . crispatus , Lb .
delbrueckii subsp. lactis , Lb .
johnsonii , Lb . fermentum ,
Bifidobacterium sp., P .
dextrinicus , Str . infantarius
subsp. infantarius , Str . mitis , Str .
lutetiensis and Weissella sp.

DGGE and
pyrosequencing

Desai et al . (2012)

Bifidobacterium longum and
Lactobacillus spp.

Culture based Vlková et al . (2012)

River trout
( Salmo trutta fario L.)

C. maltaromaticum Culture based Skrodenyte-

Arbaciauskiene et al .
(2006)

Sea trout
( Salmo trutta trutta )

Carnobacterium spp.
C. maltaromaticum

Culture based Skrodenyte-

Arbaciauskiene et al .
(2008)

Brown trout
( Salmo trutta )

C. maltaromaticum , Str.
macedonicus , Str. constellatus
and W. cibaria

Culture based and
DGGE

Abid et al . (2014)

Bifidobacterium -like DGGE and qPCR Kopecný et al . (2010)

C. divergens b
C. maltaromaticum a

Culture based
Culture based

Strøm (1988)
Ringø et al. (2006a)

Atlantic salmon
( Salmo salar )