Biology Reference
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45. Ossipova E, Fenyo D, Eriksson J. (2006) Optimizing search conditions for the
mass fingerprint-based identification of proteins. Proteomics 6 : 2079-85.
46. Keller A, Eng J, Zhang N et al . (2005) A uniform proteomics MS/MS analysis
platform utilizing open XML file formats. Mol Syst Biol 1 : Epub Aug 2.
47. Hernandez, P. (2005) Peptide identification by tandem mass spectrometry: a tag-
oriented open-modification search method. PhD thesis, University of Geneva,
Switzerland.
48. Hartler J, Thallinger GG, Stocker G et al . (2007) MASPECTRAS: a platform
for management and analysis of proteomics LC-MS/MS data. BMC
Bioinformatics 8 : 197.
49. Kohlbacher O, Reinert K, Gropl C et al . (2007) TOPP — the OpenMS pro-
teomics pipeline. Bioinformatics 23 : e191-7.
50. Chamrad DC, Koerting G, Gobom J et al . (2003) Interpretation of mass spectrom-
etry data for high-throughput proteomics. Anal Bioanal Chem 376 : 1014-22.
51. Quandt A, Hernandez P, Kunzst P et al . (2007) Grid-based analysis of tandem
mass spectrometry data in clinical proteomics. Stud Health Technol Inform
126 : 13-22.
52. Pautasso C, Bausch W, Alonso G. (2006) Autonomic computing for virtual lab-
oratories. In: Kohlas J, Meyer B, Schiper A (eds.). Dependable Systems: Software,
Computing, Networks . New York, NY: Springer Verlag, pp. 211-230.
53. Smirnova O. (2003) The NorduGrid architecture and middleware for scientific
applications. In: Sloot PMA (ed.). Proceedings of the International Conference on
Computer Science ( ICCS 2003 ). Lecture Notes in Computer Science, Vol. 2657.
Berlin, Germany: Springer-Verlag, pp. 264-273.
54. Lisacek F, Cohen-Boulakia S, Appel RD. (2006) Proteome informatics II: bioin-
formatics for comparative proteomics. Proteomics 6 : 5445-66.
55. Taylor CF, Paton NW, Garwood KL et al . (2003) A systematic approach to mod-
eling, capturing, and disseminating proteomics experimental data. Nat Biotechnol
21 : 247-54.
56. Robin X, Hoogland C, Appel RD, Lisacek F. (2008) MIAPEGelDB, a web-
based submission tool and public repository for MIAPE gel electrophoresis
documents. J Proteomics 71 : 249-51.
57. Baldock RA, Bard JB, Burger A et al . (2003) EMAP and EMAGE: a framework
for understanding spatially organized data. Neuroinformatics 1 : 309-25.
58. Uhlen M, Bjorling E, Agaton C et al . (2005) A human protein atlas for normal
and cancer tissues based on antibody proteomics. Mol Cell Proteomics 4 : 1920-32.
59. Su AI, Wiltshire T, Batalov S et al . (2004) A gene atlas of the mouse and human
protein-encoding transcriptomes. Proc Natl Acad Sci USA 101 : 6062-7.
60. Desiere F, Deutsch EW, Nesvizhskii AI et al . (2005) Integration with the human
genome of peptide sequences obtained by high-throughput mass spectrometry.
Genome Biol 6 : R9.
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