References - User-Level Workflow Design: A Bioinformatics Perspective - page 203

115. Goodman, N., Rozen, S., Stein, L.D.: Workflow Management Software for
Genome-Laboratory Informatics, From a proposal to the National Institues of
Health (1995)
116. Gordon, P., Sensen, C.: Seahawk: moving beyond HTML in Web-based bioin-
formatics analysis. BMC Bioinformatics 8(1), 208 (2007)
117. Gorlach, K., Sonntag, M., Karastoyanova, D., Leymann, F., Reiter, M.: Con-
ventional Workflow Technology for Scientific Simulation, Guide to e-Science,
pp. 1-31. Springer (March 2011)
118. Goujon, M., McWilliam, H., Li, W., et al.: A new bioinformatics analysis
tools framework at EMBL-EBI. Nucleic Acids Research 38(Web Server issue),
W695-W699 (2010)
119. Grady, J., Campbell, H., Faulk, S.R., Weiss, D.M.: Introduction to Synthesis.
Technical report, Software Productivity Consortium (June 1990)
120. Groth, P., Gil, Y.: Analyzing the Gap between Workflows and their Natural
Language Descriptions. In: IEEE Congress on Services, pp. 299-305. IEEE
Computer Society, Los Alamitos (2009)
121. Gubala, T., Herezlak, D., Bubak, M., Malawski, M.: Semantic Composition
of Scientific Workflows Based on the Petri Nets Formalism. In: Second IEEE
International Conference on e-Science and Grid Computing (e-Science 2006),
p. 12. IEEE Computer Society, Washington, DC (2006)
122. Gubala, T., Bubak, M., Malawski, M., Rycerz, K.: Semantic-Based Grid Work-
flow Composition. In: Wyrzykowski, R., Dongarra, J., Meyer, N., Wasniewski,
J. (eds.) PPAM 2005. LNCS, vol. 3911, pp. 651-658. Springer, Heidelberg
(2006)
123. Habegger, L., Sboner, A., Gianoulis, T.A., et al.: RSEQtools: a modular frame-
work to analyze RNA-Seq data using compact, anonymized data summaries.
Bioinformatics 27(2), 281-283 (2011)
124. Hagemeier, D.: GeneFisher2 - an AJAX based implementation of GeneFisher-
P. Bachelor's thesis, University Bielefeld, Faculty of Technology (December
2006)
125. Hahne, F., Huber, W., Gentleman, R., Falcon, S.: Bioconductor Case Studies.
Springer (2008)
126. Hartman, A., Riddle, S., McPhillips, T., Ludascher, B., Eisen, J.: Introduc-
ing W.A.T.E.R.S.: a Workflow for the Alignment, Taxonomy, and Ecology of
Ribosomal Sequences. BMC Bioinformatics 11(1), 317 (2010)
127. Hartmeier, S., Kruger, J., Giegerich, R.: Webservices and Workflows on the
Bielefeld Bioinformatics Server: Practices and Problems. In: Proceedings of
NETTAB 2007 - A Semantic Web for Bioinformatics, Pisa, Italy (2007)
128. Haubrock, M., Sauer, T., Schwarzer, K., et al.: A Workflow for Retrieving
Orthologous Promoters and Implications for Workflow Management Systems.
A Case Study. In. In: Proceedings of NETTAB 2007 - A Semantic Web for
Bioinformatics, Pisa, Italy (June 2007)
129. Henikoff, S., Henikoff, J.G.: Amino acid substitution matrices from protein
blocks. Proceedings of the National Academy of Sciences of the United States
of America 89(22), 10915-10919 (1992)
130. Hennessy, M., Milner, R.: Algebraic laws for nondeterminism and concurrency.
Journal of the ACM 32, 137-161 (1985)
131. Holmes, I.: Bioinformatics Workflows - BioWiki (January 2006),
http://biowiki.org/BioinformaticsWorkflows (last accessed May 5,
2013)