GeneFisher-P - User-Level Workflow Design: A Bioinformatics Perspective - page 95

Fig. 4.8 Service taxonomy of the GeneFisher-P domain model

• Enforce the use of GeneFisher .

• Do not use DNA backtranslation more than once.

Do not use Sequence alignment conservation analysis more than once.
Do not use Sequence alignment more than once.
Do not use PCR primer design more than once.

• If PCR primer design is used, do not use Sequence alignment subse-

quently.
If PCR primer design is used, do not use Sequence alignment conservation
analysis subsequently.
If PCR primer design is used, do not use DNA backtranslation subse-
quently.

• Use service WriteFile as last service in the solution.

Additional, problem-specific constraints (defined in the workflow design
phase) can narrow the possible solutions further, for instance by explicitly
working with single/multiple nucleic acid/amino acid sequences and the ac-
cordingly required processing steps (cf. Section 4.2).