Chemistry Reference
In-Depth Information
7. Clore GM, Driscoll PC, Wingfield PT, Gronenborn AM (1990) Analysis of the backbone
dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear
15
N-1H
NMR spectroscopy. Biochemistry 29:7387-7401
8. Palmer AG, Rance M, Wright PE (1991) Intramolecular motions of a zinc finger DNA-
binding domain from Xfin characterized by proton-detected natural abundance 13 C
heteronuclear NMR spectroscopy. J Am Chem Soc 113:4371-4380
9. Schneider DM, Dellwo MJ, Wand AJ (1992) Fast internal main-chain dynamics of human
ubiquitin. Biochemistry 31:3645-3652
10. Mandel AM, Akke M, Palmer AG (1995) Backbone dynamics of
Escherichia
-
coli
ribonuclease
Hi - correlations with structure and function in an active enzyme. J Mol Biol 246:144-163
11. Tjandra N, Kuboniwa H, Ren H, Bax A (1995) Rotational dynamics of calcium-free calmo-
dulin studied by
15
N-NMR relaxation measurements. Eur J Biochem 230:1014-1024
12. Dayie KT, Wagner G, Lefevre JF (1996) Theory and practice of nuclear spin relaxation in
proteins. Annu Rev Phys Chem 47:243-282
13. Lee LK, Rance M, Chazin WJ, Palmer AGr (1997) Rotational diffusion anisotropy of
proteins from simultaneous analysis of 15N and 13C alpha nuclear spin relaxation. J Biomol
NMR 9:287-298
14. Kroenke CD, Loria JP, Lee LK, Rance M, Palmer AG (1998) Longitudinal and transverse
H-1-N-15 dipolar N-15 chemical shift anisotropy relaxation interference: unambiguous
determination of rotational diffusion tensors and chemical exchange effects in biological
macromolecules. J Am Chem Soc 120:7905-7915
15. Fushman D, Tjandra N, Cowburn D (1999) An approach to direct determination of protein
dynamics fromN-15 NMR relaxation at multiple fields, independent of variable N-15 chemical
shift anisotropy and chemical exchange contributions. J Am Chem Soc 121:8577-8582
16. Andrec M, Montelione GT, Levy RM (1999) Estimation of dynamic parameters from NMR
relaxation data using the Lipari-Szabo model-free approach and Bayesian statistical methods.
J Magn Reson 139:408-421
17. Lee AL, Wand AJ (1999) Assessing potential bias in the determination of rotational
correlations times of proteins by NMR. J Biomol NMR 13:101-112
18. Campbell AP, Spyracopoulos L, Irvin RT, Sykes BD (2000) Backbone dynamics of a
bacterially expressed peptide from the receptor binding domain of Pseudomonas aeruginosa
pilin strain PAK from heteronuclear
1
H-15N NMR spectroscopy. J Biomol NMR 17:239-255
19. Ishima R, Torchia DA (2000) Protein dynamics from NMR. Nat Struct Biol 7:740-743
20. Fushman D, Cowburn D (2001) Nuclear magnetic resonance relaxation in determination
of residue-specific N-15 chemical shift tensors in proteins in solution: protein dynamics,
structure, and applications of transverse relaxation optimized spectroscopy. Methods
Enzymol Nucl Magn Reson Biol Macromol Pt B 339:109-126
21. Palmer AG 3rd (2001) NMR probes of molecular dynamics: overview and comparison
with other. Annu Rev Biophys Biomol Struct 30:129-155
22. Bruschweiler R (2003) New approaches to the dynamic interpretation and prediction of NMR
relaxation data from proteins. Curr Opin Struct Biol 13:175-183
23. d'Auvergne EJ, Gooley PR (2003) The use of model selection in the model-free analysis of
protein dynamics. J Biomol NMR 25:25-39
24. Pelupessy P, Ravindranathan S, Bodenhausen G (2003) Correlated motions of successive
amide N-H bonds in proteins. J Biomol NMR 25:265-280
25. Idiyatullin D, Daragan VA, Mayo KH (2003) (NH)-N-15 backbone dynamics of protein GB1:
comparison of order parameters and correlation times derived using various “model-free”
approaches. J Phys Chem B 107:2602-2609
26. Redfield C (2004) Using nuclear magnetic resonance spectroscopy to study molten globule
states of proteins. Methods Mol Biol 34:121-132
27. Chen J, Brooks CLI, Wright PE (2004) Model-free analysis of protein dynamics: assessment
of accuracy and model selection protocols based on molecular dynamics simulation. J Biomol
NMR 29:243-257
