Biology Reference
In-Depth Information
Table 2.
Aromatic degradation in
D. aromatica
: mono- and di-oxygenases.
VIMSS id
Orthologs
Putative function
Size aas
581514
TbuA I /TmoA/TouA/PhiK/Tbc2A
methane/phenol/toluene hydroxylase
501
581515
TbuU/T moE/T ouB/PhiL/Tbc2B
toluene-4-monooxygenase
88
581516
TbuB/T moC/T ouC/PhiM/Tbc2C
ferredoxin subunit of ring-
hydroxylating dioxygenase
111
581517
TbuV/TmoD/TouD/PhiN/Tbc2C
monooxygenase
146
581518
TbuA2/T moB/T ouE/PhiO/Tbc2E
hydroxylase
328
581519
TbuC/TmoF/TouF/PhiP/Tbc2F
fl avodoxin reductase
338
581520
TbuX/TodX/XyiN
membrane protein; transport
464
581521
histidine kinase
signal transduction
963
581522
Narl
cheY like protein
208
581523
methyl-accepting chemotaxis protein
chemotaxis sensory transducer, membrane bound
532
581524
4-oxalocrotonate tautomerase
tautomerase
144
581525
oxidoreductase
oxidoreductase/dehydrogenase
254
581526
MhpE
4-hydroxy-2-oxovalerate aldolase
354
581527
MhpF
EC 1.2.1.1 0 Acetaldehyde dehydrogenase (acety-
lating)
305
581528
2-hydroxymuconic semialdehyde
dehydrogenase
NAD+-dependent dehydrogenase (EC 1.2.1.60)
489
581529
ring-cleaving extradiol dioxygenase
catechol 2,3 dioxygenase ( 1.13.1 1.2)
311
581530
aldolase
4-hydroxyphenylacetic acid catabolism pathway
266
581531
S box domain
signal transduction
143
584293
orf
unknown
63
581532
orf
unknown
80
584294
EAL domain containing protein (ob-
solete in current YIMSS database)
diguanylate phosphodiesterase; signaling
65
581533
transcriptional regulator
LysR-type
300
581534
response regulator, tbuT family
activator of aromatic catabolism
558
812947
PhcK/DmpK/PhhK/PheA I /Tcb IA/
AphK
monooxygenase
89
581535
PhcL/DmpL/PhhL/PheA2/Tcb I B/
Aphl
hydroxylase
329
581536
PhcM/DmpM/PhhM/PheA3/T cb I
C/AphM
monooxygenase
89
581537
PhcN/DmpN/PhhN/PheA4/T cb I D
aromatic hydroxylase
517
581538
PhcO/DmpO/Phh0/PheA5/T cb I E/
AphO
aromatic hydroxylase
118
581539
PhcP/Dmp/PhhP/PheA6/Tcb I F/
AphQ
hydroxylase reductase
353
581540
ferredoxin
2Fe-2S ferredoxin, iron-sulfur binding site
112
581541
transcriptional regulator
IPR000524: Bacterial regulatory protein GntR,
HTH
235
581542
ring-cleaving extradiol dioxygenase
catechol 2,3 dioxygenase (EC 1. 13.1 1.2)
308
581543
orf
unknown
142
581544
2-hydroxymuconic semialdehyde
dehydrogenase
NAD+-dependent dehydrogenase (EC 1.2.1.60)
484
