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(A)
(B)
O6
O4
Fe
l
O5
O3
O6
O2
C1
C7
O1
C7
O5
O1
C1
O4
O
water 1
Fe
ll
Fe
l
O2
O3
O
water 2
(C)
(D)
FIGURE 3.5
Methyl-α-d-mannopyranoside. molecule. in. water. (A). obtained. from. CPMD.
simulations,.(B).obtained.from.CMD.simulations,.and.its.complexes.with.one.and.two.Fe
3+
.
ions,.and.(C,.D).obtained.from.CPMD.simulations,.with.conventional.numbering.of.speciic.
atoms.
To.study.the.coordination.of.more.than.one.Fe
3+
.ion.to.M,.we.performed.chemical.
reactivity.index.calculations.in.the.vicinity.of.Fe
3+
.and.water.molecules.and.simu-
lated.M.in.water.with.two.Fe
3+
.ions.(Figure.3.5)..The.chemical.reactivity.calcula-
tions.on.a.trajectory.of.M-Fe
3+
.with.the.irst.shell.of.water.molecules.obtained.from.
CPMD.simulations.show.that.the.heavy.atoms.of.the.carbohydrate.are.not.reactive.
toward.a.second.Fe
3+
.ion.(Table.3.2)..This.inding.is.consistent.with.the.experimental.
results..CPMD.simulations.show.that.the.irst.Fe
3+
.ion.is.still.coordinated.to.O3.and.
O4.atoms.in.the.presence.of.the.second.Fe
3+
.ion..However,.the.distances.between.the.
Fe
3+
.ion.and.O3.and.O4.atoms.are.slightly.larger.in.the.presence.of.the.second.Fe
3+
.
ion,.with.values.of.3.4.±.0.1.and.4.3.±.0.2.Å,.respectively.(Figure.3.5.and.Table.3.4)..
Furthermore,.the.simulations.with.a.single.Fe
3+
.ion.show.the.metal.ion.to.be.almost.
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