Biology Reference
In-Depth Information
Understanding will more likely come from analysing subsystems of such a
model, and less likely from the full model itself, but as discussed earlier, complex
evolved systems may be simulable without being readily comprehensible.
REFERENCES
Bennett FH, Koza JR & Yu J, Mydlowec W.
Automatic synthesis, placement and routing of an
amplifier circuit by means of genetic programming
. Lecture Notes in Computer Science:
1801, 1-10, 2000.
Black S & Wright NG.
-aspartokinase and
-aspartyl phosphate
. Journal of Biological Chem-
istry: 213, 27-38, 1955.
Blackman FF.
Optima and limiting factors
. Annals of Botany: 19, 281, 1905.
Burns JA, Cornish-Bowden A, Groen AK, Heinrich R, Kacser H, Porteous JW, Rapoport SM,
Rapoport TA, Stucki JW, Tager JM, Wanders RJA & Westerhoff HV.
Control analysis of
metabolic systems
. Trends in Biochemical Sciences: 10, 16, 1985.
Chance B, Holmes W, Higgins JJ & Connelly CM.
Localization of interaction sites in multi-
component transfer systems: Theorems derived from analogues
. Nature (London): 182,
1190-1193, 1958.
Chassagnole C, Fell DA, Rais B, Kudla B & Mazat JP.
Control of the threonine-synthesis pathway
in
Escherichia coli
: A theoretical and experimental approach
. Biochemical Journal: 356,
433-444, 2001.
Cornish-Bowden A & Cárdenas ML (Eds.).
Control of Metabolic Processes.
NATO ASI Series,
Plenum Press, New York, 1990.
Crabtree B & Newsholme EA.
A quantitative approach to metabolic control
. Current Topics in
Cellular Regulation: 25, 21-76, 1985.
Deckard A & Sauro HM.
Preliminary studies on the
in silico
evolution of biochemical networks
.
ChemBioChem: 5, 1423-1431, 2004.
Denton RM & Pogson CI.
Metabolic Regulation.
Chapman Hall, London, 1976.
Dujon, B.
European Functional Analysis Network (EUROFAN) and the functional analysis of the
Saccharomyces cerevisiae
genome
. Electrophoresis: 19, 617-624, 1998.
Fell DA.
Understanding the Control of Metabolism.
Portland Press, London, 1997.
Fell DA & Snell K.
Control analysis of mammalian serine biosynthesis
. Biochemical Journal:
256, 97-101, 1988.
Garfinkel D & Hess B.
Metabolic control mechanisms VII. a detailed computer model of the
glycolytic pathway in ascites cells
. Journal of Biological Chemistry: 239, 971-983, 1964.
Garry DJ, Ordway GA, Lorenz JN, Radford NB, Chin ER, Grange RW, Bassel-Duby R &Williams
RS.
Mice without myoglobin
. Nature: 395, 905-8, 1998.
Grange RW, Meeson A, Chin E, Lau KS, Stull JT, Shelton JM, Williams RS & Garry DJ.
Functional and molecular adaptations in skeletal muscle of myoglobin-mutant mice
. American
Journal of Physiological - Cell Physiology: 281, C1487-94, 2001.
Groen AK, Wanders RJA, Westerhoff HV, van der Meer R & Tager JM.
Quantification of the
contribution of various steps to the control of mitochondrial respiration
. Journal of Biological
Chemistry: 257, 2754-2757, 1982.
Heinrich R & Rapoport TA.
A linear steady-state treatment of enzymatic chains; general proper-
ties, control and effector strength
. European Journal of Biochemistry: 42, 89-95, 1974.
Heinrich R & Schuster S.
The modelling of metabolic systems: Structure, control and optimality
.
Biosystems: 47, 61-77, 1998.