Biology Reference
In-Depth Information
solutions. Proc Natl Acad Sci USA 104:
1111-1117
46. Hogan CJ, Carroll JA, Rohrs HW et al (2009)
Combined charged residue-field emission
model of macromolecular electrospray ioniza-
tion. Anal Chem 81:369-377
47. Knochenmuss R (2006) Ion formation mech-
anism in UV MALDI. Analyst 131:966-986
48. Chang WC, Huang LCL, Wang Y-S et al
(2007) Matrix-assisted laser desorption/ion-
ization (MALDI) mechanism revisited. Anal
Chim Acta 582:1-9
49. Hillenkamp F, Peter-Katalinic J (2007) MALDI
MS. A practical guide to instrumentation, meth-
ods and applications. Wiley-VCH, Weinheim
50. Laiko VV, Baldwin MA, Burlingame AL
(2000) Atmospheric pressure matrix-assisted
laser desorption/ionization mass spectrome-
try. Anal Chem 72:652-657
51. Guilhaus M, Selby D, Mlynski V (2000)
Orthogonal acceleration time-of-flight mass
spectrometry. Mass Spectrom Rev 19:65-107
52. Chernushevich IV, Loboda AV, Thomson BA
(2001) An introduction to quadupole/time-
of-light mass spectrometry. J Mass Spectrom
36:849-865
53. Gillet LC, Navarro P, Tate S et al (2012)
Targeted data extraction of the MS/MS spec-
tra generated by data-independent acquisi-
tion: a new concept for consistent and
accurate proteome analysis. Mol Cell
Proteomics 11:O111.016717. doi:
10.1074/
54. Mamyrin BA (2001) Time-of-flight mass
spectrometry (concepts, achievements, and
prospects). Int J Mass Spectrom 3:251-266
55. Cornish TJ, Cotter RJ (1993) Tandem time-
of-light mass spectrometer. Anal Chem
15:1043-1047
56. Brown RS, Lennon JJ (1995) Mass resolution
improvement by incorporation of pulsed ion
extraction in a matrix-assisted laser desorp-
tion/ionization linear time-of-flight mass
spectrometer. Anal Chem 67:1998-2003
57. Clauser KR, Baker P, Burlingame AL (1999)
Role of accurate mass measurement
(+/−10 ppm) in protein identification strate-
gies employing MS or MS/MS and database
searching. Anal Chem 71:2871-2882
58. Hager JW (2002) A new linear ion trap MS.
Rapid Commun Mass Spectrom 16:512-526
59. Le Blanc JC, Hager JW, Ilisiu AM et al (2003)
Unique scanning capabilities of a new hybrid
linear ion trap mass spectrometer (Q TRAP)
used for high sensitivity proteomics applica-
tions. Proteomics 3:859-869
60. Douglas D, Frank A, Mao D (2005) Linear
ion traps in MS. Mass Spectrom Rev 24:1-29
61. Douglas DJ (1993) Multipole inlet systems
for ion traps. US Patent 5,179,278
62. Syka JE, Marto JA, Bai DL et al (2004) Novel
linear quadrupole ion trap/FT mass spec-
trometer: performance characterization and
use in the comparative analysis of histone H3
post-translational modifications. J Proteome
Res 3:621-626
63. Makarov A (2000) Electrostatic axially har-
monic orbital trapping: a high-performance
technique of mass analysis. Anal Chem
72:1156-1162
64. Kingdon KH (1923) A method for the neu-
tralization of electron space charge by positive
ionization at very low gas pressures. Phys Rev
21:408-418
65. Knight RD (1981) Storage of ions from laser-
produced
plasmas.
Appl
Phys
Lett
38:221-223
66. Scigelova M, Hornshaw M, Giannakopoulos
A et al (2011) Fourier transform mass spec-
trometry. Mol Cell Proteomics 10(7). doi
67. Makarov A, Denisov E, Lange O (2009)
Performance evaluation of a high-field
Orbitrap mass analyzer. J Mass Spectrom
20:1391-1396
68. Makarov A, Denisov E, Kholomeev A et al
(2006) Performance evaluation of a hybrid
linear ion trap/Orbitrap mass spectrometer.
Anal Chem 78:2113-2120
69. Makarov A, Horning S, Mann M (2007)
Higher-energy C-trap dissociation for peptide
modification
analysis.
Nat
Methods
4:709-712
70. Syka JE, Coon JJ, Schroeder MJ et al (2004)
Peptide and protein sequence analysis by elec-
tron transfer dissociation mass spectrometry.
Proc Natl Acad Sci USA 101:9528-9533
71. Olsen JV, Macek B, Lange O et al (2006) The
utility of ETD mass spectrometry in pro-
teomic analysis. Biochim Biophys Acta
1764:1811-1822
72. Strupat K, Kovtoun V, Bui H et al (2009)
MALDI produced ions inspected with a linear
ion trap-Orbitrap hybrid mass analyzer. J Am
Soc Mass Spectrom 20:1451-1463
73. Geiger T, Cox J, Mann M (2010) Proteomics
on an Orbitrap benchtop mass spectrometer
using all—ion fragmentation. Mol Cell
Proteomics 9:2252-2261
74. Gallien S, Duriez E, Crone C et al (2012)
Targeted proteomic quantification on quad-
rupole—orbitrap mass spectrometer. Mol
Cell Proteomics 11:1709-1723
75. Olsen JV, Schwartz JC, Griep-Raming J et al
(2009) A new instrument for high-speed
