Biology Reference
In-Depth Information
References
1. Raven JA (1993) The evolution of vascular
plants in relation to quantitative functioning of
dead water-conducting cells and stomata. Biol
Rev 68:337-363
2. Sattelmacher B (2001) The apoplast and its
signifi cance for plant mineral nutrition. New
Phytol 149:167-192
3. Fukuda H (1996) Xylogenesis: initiation, pro-
gression, and cell death. Annu Rev Plant
Physiol Plant Mol Biol 47:299-325
4. Satoh S (2006) Organic substances in xylem
sap delivered to above-ground organs by the
roots. J Plant Res 119:179-187
5. Buhtz A, Kolasa A, Arlt K et al (2004) Xylem
sap protein composition is conserved among
different plant species. Planta 219:610-618
6. Kehr J, Buhtz A, Giavalisco P (2005) Analysis
of xylem sap proteins from
Brassica napus
.
BMC Plant Biol 5:11
7. Ligat L, Lauber E, Albenne C et al (2011)
Analysis of the xylem sap proteome of
Brassica
oleracea
reveals a high content in secreted
proteins. Proteomics 11:1798-1813
8. Masuda S, Kamada H, Satoh S (2001)
Chitinase in cucumber xylem sap. Biosci
Biotechnol Biochem 65:1883-1885
9. Djordjevic M, Oakes M, Li et al (2007) The
Glycine max
xylem sap and apoplast proteome.
J Proteome Res 6:3771-3779
10. Krishnan H, Natarajan S, Bennett J et al (2011)
Protein and metabolite composition of xylem
sap from fi eld-grown soybeans (
Glycine max
).
Planta 233:921-931
11. Biles C, Abeles F (1991) Xylem sap proteins.
Plant Physiol 96:597-601
12. Aki T, Shigyo M, Nakano R et al (2008) Nano
scale proteomics revealed the presence of regu-
latory proteins including three FT-like proteins
in phloem and xylem saps from rice. Plant Cell
Physiol 49:767-790
13. Dafoe N, Constabel C (2009) Proteomic anal-
ysis of hybrid poplar xylem sap. Phytochemistry
70:856-863
14. Aguero C, Thorne E, Ibanez A et al (2008)
Xylem sap proteins from
Vitis vinifera
L.
Chardonnay. Am J Enol Vitic 59:306-311
15. Basha S, Mazhar H, Vasanthaiah H (2010)
Proteomics approach to identify unique xylem
sap proteins in Pierce's disease-tolerant Vitis spe-
cies. Appl Biochem Biotechnol 160:932-944
16. Alvarez S, Goodger J, Marsh E et al (2006)
Characterization of the maize xylem sap pro-
teome. J Proteome Res 5:963-972
17. Fernandez-Garcia N, Hernandez M, Casado-
Vela J et al (2011) Changes to the proteome
and targeted metabolites of xylem sap in
Brassica oleracea
in response to salt stress. Plant
Cell Environ 34:821-836
18. Alvarez S, Marsh E, Schroeder S et al (2008)
Metabolomic and proteomic changes in the
xylem sap of maize under drought. Plant Cell
Environ 31:325-340
19. Rep M, Dekker H, Vossen J et al (2002) Mass
spectrometric identifi cation of isoforms of PR
proteins in xylem sap of fungus-infected
tomato. Plant Physiol 130:904-917
20. Houterman P, Speijer D, Dekker H et al
(2007) The mixed xylem sap proteome of
Fusarium oxysporum
-infected tomato plants.
Mol Plant Pathol 8:215-221
21. Li S, Hartman G, Lee B-S et al (2000)
Identifi cation of a stress-induced protein in
stem exudates of soybean seedlings root-
infected with
Fusarium solani
f. sp.
glycines
.
Plant Physiol Biochem 38:803-809
22. Subramanian S, Cho U-H, Keyes C et al (2009)
Distinct changes in soybean xylem sap proteome
in response to pathogenic and symbiotic
microbe interactions. BMC Plant Biol 9:119
23. Emanuelsson O, Brunak S, von Heijne G et al
(2007) Locating proteins in the cell using
TargetP, SignalP, and related tools. Nat Protoc
2:953-971
24. Small I, Peters N, Legeai F et al (2004)
Predotar: a tool for rapidly screening pro-
teomes for N-terminal targeting sequences.
Proteomics 4:1581-1590
25. Fankhauser N, Mäser P (2005) Identifi cation
of GPI anchor attachment signals by a Kohonen
self-organizing map. Bioinformatics 21:
1846-1852
26. Eisenhaber B, Wildpaner M, Schultz CJ et al
(2003) Glycosylphosphatidylinositol lipid
anchoring of plant proteins. Sensitive predic-
tion from sequence- and genome-wide studies
for Arabidopsis and rice. Plant Physiol 133:
1691-1701
27. Sigrist CJA, Cerutti L, de Castro E et al (2010)
PROSITE, a protein domain database for func-
tional characterization and annotation. Nucleic
Acids Res 38(D):161-166
28. Punta M, Coggill PC, Eberhardt RY et al
(2012) The Pfam protein families database.
Nucleic Acids Res 40(D):290-301
29. McDowall J, Hunter S (2011) InterPro pro-
tein classifi cation. Methods Mol Biol 694:
37-47
30. Altschul SF, Madden TL, Schäffer AA et al
(1997) Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs.
Nucleic Acids Res 25:3389-3402
