Biology Reference
In-Depth Information
Banerjee-Basu, S., Ryan, J.F., and Baxevanis, A.D., (2000). The homeodomain resource: a prototype
database for a large protein family.
Nucleic Acids Res.
28
: 329-330.
Barker, W.C., Garavelli, J.S., Huang, H., McGarvey, P.B., Orcutt, B.C., and Srinivasarao, G.Y., et al.
(2000). The protein information resource (PIR).
Nucleic Acids Res.
28
: 41-44.
Barnes, W.M., (1987). Sequencing DNA with dideoxyribonucleotides as chain terminators: hints
and strategies for big projects.
Methods Enzymol.
152
: 538-556.
Baxevanis, A.D., (2001). The molecular biology database collection: an updated compilation of
biological database resources.
Nucleic Acids Res.
29
: 1-10.
Baxevanis, A.D., and Ouellette, B.F., Eds., (2001).
Bioinformatics: A Practical Guide to the Analysis
of Genes and Proteins
, 2nd Ed. Wiley Publishing, New York.
Beloqui, A., Guazzaroni, M.E., Pazos, F., Vieites, J.M., Godoy, M., and Golyshina, O.V., et al. (2009).
Reactome array: forging a link between metabolome and genome.
Science
326
: 252-257.
Bennett, S.T., Barnes, C., Cox, A., Davies, L., and Brown, C., (2005). Toward the 1,000 dollars human
genome.
Pharmacogenomics
6
: 373-382.
Bentley, D.R., (2006). Whole-genome re-sequencing.
Curr. Opin. Genet. Dev.
16
: 545-552.
Bevan, I.S., Rapley, R., and Walker, M.R., (1992). Sequencing of PCR-amplified DNA.
Genome Res.
1
:
222-228.
Bonasio, R., Zhang, G., Ye, C., Mutti, N.S., Fang, X., and Qin, W., et al. (2010). Genomic comparison
of the ants
Camponotus floridanus
and
Harpegnathos saltator
.
Science
329
: 1068-1071.
Bonetta, L., (2010). Interactome under construction.
Nature
468
: 851-854.
Bork, P., (2000). Powers and pitfalls in sequence analysis: the 70% hurdle.
Genome Res.
10
:
398-400.
Bradley, R.D., and Hillis, D.M., (1997). Recombinant DNA sequences generated by PCR
amplification.
Mol. Biol. Evol.
14
: 592-593.
Brazma, A., and Vilo, J., (2000). Gene expression data analysis.
FEBS Lett.
480
: 17-24.
Brent, R., (2000). Genomic biology.
Cell
100
: 169-183.
Brosius, J., (1999). Genomes were forged by massive bombardments with retroelements and
retrosequences.
Genetica
107
: 209-238.
Burke, G.R., and Moran, N.A., (2011). Responses of the pea aphid transcriptome to infection by
facultative symbionts.
Insect Mol. Biol.
20
: 357-365.
Burley, S.K., (2000). An overview of structural genomics.
Nat. Struct. Biol.
(
Suppl
.
10
): 932-934.
Caceres, M., Ranz, J.M., Barbadilla, A., Long, M., and Ruiz, A., (1999). Generation of a widespread
Drosophila
inversion by a transposable element.
Science
285
: 415-418.
Callaway, E., (2011). Genome giant offers data service.
Nature
475
: 436-437.
Capy, P., Gasperi, G., Hiemont, C., and Bazin, C., (2000). Stress and transposable elements:
co-evolution or useful parasites?
Heredity
85
: 101-106.
Celis, J.E., Kruhoffer, M., Gromova, I., Frederiksen, C., Ostergaard, M., and Thykjaer, T., et al.
(2000). Gene expression profiling: monitoring transcription and translation products using
DNA microarrays and proteomics.
FEBS Lett.
480
: 2-16.
Chain, P.S.G., Grafham, D.V., Fulton, R.S., FitzGerald, M.G., Hostetler, J., and Muzny, D., et al.
(2009). Genome project standards in a new era of sequencing.
Science
326
: 236-237.
Chan, Q.W., and Foster, L.J., (2008). Changes in protein expression during honey bee larval
development.
Genome Biol.
9
: R156.
Chen, X., and Tompa, M., (2010). Comparative assessment of methods for aligning multiple
genome sequences.
Nat. Biotechnol.
28
: 567-572.
Cherf, G.M., Lieberman, K.R., Rashid, H., Lam, C.E., Karplus, K., and Akeson, M., (2012). Automated
forward and reverse ratcheting of DNA in a nanopore at 5-Angstrom precision.
Nat.
Biotechnol.
30
: 344-348.
Chintapalli, V.R., Wang, J., and Dow, J.A.T., (2007). Using FlyAtlas to identify better
Drosophila
melanogaster
models of human disease.
Nat. Genet.
39
: 715-720.