Biomedical Engineering Reference
In-Depth Information
adipose cell-size distributions at discrete time points can be used to theoretically
examine the dynamic processes (e.g., cell recruitment, growth/shrinkage, and
death) in adipose tissues, because cell-size distributions reflect what adipose cells
experience during their life span. We introduce a Bayesian method to deduce
longitudinal information from changes of the cross-sectional information of
adipose cell-size distributions measured at different times. Bayesian inference has
been applied to understand not only the adipose tissue dynamics [
16
,
17
], but also
pancreatic islet development [
18
].
Given the mean and uncertainty of measured frequencies, m
i
and dm
i
at the ith
bin,
the
maximum
entropy
principle
[
19
]
gives
the
likelihood
of
predicted
frequencies n
i
ð
x
Þ
of a model M associated with a set of parameters x as
exp
m
i
n
i
ð
x
Þ
2
2dm
i
¼ exp½
E
ð
x
Þ;
P
ð
D
j
x
;
M
Þ/
Y
i
ð
1
Þ
where the mismatch between the measurement and prediction is quantified as a
cost,
m
i
n
i
ð
x
Þ
2
2dm
i
E
ð
x
Þ
¼
X
i
:
ð
2
Þ
In this chapter, the model M will be a dynamic model that predicts the evolution
of adipose cell-size distributions m
i
:
The set of parameters x represents physical
processes such as recruitment, growth, death rates, and their size dependences.
Bayes' rule (or product rule in probability theory) gives the posterior proba-
bility distribution of the parameter set x
;
given data D and model M [
20
]:
P
ð
x
j
D
;
M
Þ
¼P
ð
x
j
M
Þ
P
ð
D
j
x
;
M
Þ
P
ð
x
j
M
Þ
exp½
E
ð
x
Þ
R
dx P
ð
x
j
M
Þ
exp½
E
ð
x
Þ
;
P
ð
D
j
M
Þ
¼
ð
3
Þ
where P
ð
x
j
M
Þ
is the prior distribution of x, usually set as constant with the
assumption of complete ignorance. Using the probability P
ð
x
j
D
;
M
Þ
, tis
straightforward to compute the mean and uncertainty of parameter x:
x ¼
Z
dx xP
ð
x
j
D
;
M
Þ;
ð
4
Þ
dx
2
¼
Z
dx x
2
P
ð
x
j
D
;
M
Þ
x
2
:
ð
5
Þ
Monte Carlo (MC) methods are usually used to compute these, because the
update in MC is determined by the probability P
ð
x
j
D
;
M
Þ
.
Generally we can propose several hypothetical models to explain the given
data. Bayesian model comparison is particularly appropriate in such a context
because Bayes' rule balances model complexity and goodness of fit. An overly
Search WWH ::
Custom Search