Biology Reference
In-Depth Information
7. Eisenhauer N, Scheu S, Jousset A. Bacterial diversity stabilizes community productivity. PLoS One . 2012;7(3):
e34517.
8. Wagner M, Loy A. Bacterial community composition and function in sewage treatment systems. Curr Opin
Biotechnol . 2002;13(3):218
227.
9.
Ishii K, Takii S. Comparison of microbial communities in four different composting processes as evaluated by
denaturing gradient gel electrophoresis analysis. J Appl Microbiol . 2003;95(1):109
119.
10. Kan J, et al. Current production by bacterial communities in microbial fuel cells enriched from wastewater
sludge with different electron donors. Environ Sci Technol . 2011;45(3):1139
1146.
11. Sekiguchi Y, Kamagata Y, Harada H. Recent advances in methane fermentation technology. Curr Opin
Biotechnol . 2001;12(3):277
282.
12. Sleight SC, et al. Designing and engineering evolutionary robust genetic circuits. J Biol Eng . 2010;4:12.
13. Swenson W, Wilson DS, Elias R. Artificial ecosystem selection. Proc Natl Acad Sci USA .
2000;97(16):9110 9114.
14. Gihring TM, et al. A limited microbial consortium is responsible for extended bioreduction of uranium in a
contaminated aquifer. Appl Environ Microbiol . 2011;77(17):5955 5965.
15. Hollister EB, et al. Structure and dynamics of the microbial communities underlying the carboxylate platform
for biofuel production. Appl Microbiol Biotechnol . 2010;88(1):389 399.
16. Klitgord N, Segre D. Ecosystems biology of microbial metabolism. Curr Opin Biotechnol . 2011;22
(4):541 546.
17. Stolyar S, et al. Metabolic modeling of a mutualistic microbial community. Mol Syst Biol . 2007;3:92.
18. Taffs R, et al. In silico approaches to study mass and energy flows in microbial consortia: a syntrophic case
study. BMC Syst Biol . 2009;3:114.
19. Zomorrodi AR, Maranas CD. OptCom: a multi-level optimization framework for the metabolic modeling and
analysis of microbial communities. PLoS Comput Biol . 2012;8(2):e1002363.
20. Zhuang K, et al. Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in
anoxic subsurface environments. ISME J . 2011;5(2):305
316.
21. Sharan SK, et al. Recombineering: a homologous recombination-based method of genetic engineering.
Nat Protoc . 2009;4(2):206
223.
22. Wang HH, et al. Programming cells by multiplex genome engineering and accelerated evolution. Nature .
2009;460(7257):894
323
898.
23. Wang HH, Church GM. Multiplexed genome engineering and genotyping methods applications for synthetic
biology and metabolic engineering. Methods Enzymol . 2011;498:409
426.
24. Wang H, Kim K, Cong L, Jeong J, Bang D, Church GM. Genome-scale promoter engineering by coselection
MAGE . Nat Methods . 2012;9(6):591
593.
25. Isaacs FJ, et al. Precise manipulation of chromosomes in vivo enables genome-wide codon replacement.
Science . 2011;333(6040):348 353.
26. Kosuri S, et al. Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips.
Nat Biotechnol . 2010;28(12):1295 1299.
27. Kato S, et al. Network relationships of bacteria in a stable mixed culture. Microb Ecol . 2008;56
(3):403 411.
28. Jousset A, et al. Intraspecific genotypic richness and relatedness predict the invasibility of microbial
communities. ISME J . 2011;5(7):1108 1114.
29. Keasling JD. Manufacturing molecules through metabolic engineering. Science . 2010;330(6009):1355 1358.
30. Na D, Kim TY, Lee SY. Construction and optimization of synthetic pathways in metabolic engineering.
Curr Opin Microbiol . 2010;13(3):363
370.
31. Pernthaler A, et al. Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture
and metagenomics. Proc Natl Acad Sci USA . 2008;105(19):7052
7057.
32. Ma Q, et al. Integrated proteomic and metabolomic analysis of an artificial microbial community for two-step
production of vitamin C. PLoS One . 2011;6(10):e26108.
33. Ren Q, Chen K, Paulsen IT. TransportDB: a comprehensive database resource for cytoplasmic membrane
transport systems and outer membrane channels. Nucleic Acids Res . 2007;35(Database issue):D274
D279.
34. Dubey GP, Ben-Yehuda S. Intercellular nanotubes mediate bacterial communication. Cell . 2011;144
(4):590
600.
35. Shou W, Ram S, Vilar JM. Synthetic cooperation in engineered yeast populations. Proc Natl Acad Sci USA .
2007;104(6):1877
1882.
36. Kerner A, et al. A programmable Escherichia coli consortium via tunable symbiosis. PLoS One . 2012;7(3):
e34032.
Search WWH ::




Custom Search