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36. Tomita S, Tsuge K, Kikuchi Y, Itaya M. Targeted isolation of a designated region of the Bacillus subtilis 168
genome by recombinational transfer. Appl Environ Microbiol . 2004;70:2508
2513.
37. Tomita S, Tsuge K, Kikuchi Y, Itaya M. Regional dependent efficiency for recombinational transfer of the
Bacillus subtilis 168 genome. Biosci Biotech Biochem . 2004;68:1382
1384.
38. Shizuya H, Birren B, Kim UJ, et al. Cloning and stable maintenance of 300-kilobase-pair fragments of human
DNA in Escherichia coli using an F- factor-based vector. Proc Natl Acad Sci USA . 1992;89:8794
8797.
39. Osoegawa K, Mammoser AG, Wu C, Frengen E, Zeng C, Catanese JJ. A bacterial artificial chromosome library
for sequencing the complete human genome. Genome Res . 2001;11:483
496.
40. Frengen E, Weichenhan D, Zhao B, Osoegawa K, van Geel M. A modular, positive selection bacterial artificial
chromosome vector with multiple cloning sites. Genomics . 1999;58:250
253.
41. Hardy S, Legagneux V, Audic Y, Paillard L. Reverse genetics in eukaryotes. Biol Cell . 2010;102:561
580.
42. Kaneko S, Tsuge K, Takeuchi T, Itaya M. Conversion of submegasized DNA to desired structures using a novel
Bacillus subtilis genome vector. Nucleic Acids Res . 2003;31(18):e112.
43. Kaneko S, Takeuchi T, Itaya M. Genetic connection of two contiguous bacterial artificial chromosomes using
homologous recombination in Bacillus subtilis genome vector. J Biotechnol . 2009;139:211 213.
44. Tomita S, Tsuge K, Kikuchi Y, Itaya, M. Regional dependent efficiency for recombinational transfer of the
Bacillus subtilis 168 genome. Biosci Biotech Biochem . 2004;68:1382 1384.
45. Ohtani, N., Hasegawa, M., Sato, M., Tomita, M., Kaneko, S. and Itaya, M. Serial assembly of thermus
megaplasmid DNA in the genome of Bacillus subtilis 168: A BAC-based domino method applied to DNA with
high GC content. Biotechonol J . 2012;7(7):867 876.
46. Gibson DG. Enzymatic assembly of overlapping DNA fragments. Methods Enzymol . 2011;498:349 361.
47. Gerdes S, Edwards R, Kubal M, Fonstein M, Stevens R, Osterman A. Essential genes on metabolic maps.
Curr Opin Biotechnol . 2006;17:448
456.
48.
Juhas M, Eberl L, Glass JI. Essence of life: essential genes of minimal genomes. Trends Cell Biol .
2011;21:562
568.
49.
260.
50. Mushegian AR, Koonin EV. A minimal gene set for cellular life derived by comparison of complete bacterial
genomes. Proc Natl Acad Sci USA . 1996;93:10268
Itaya M. An estimation of minimal genome size required for life. FEBS Lett . 1995;362:257
10273.
51. Glass JI, Hutchison III CA, Smith HO, Venter JC. A systems biology tour de force for a near-minimal
bacterium. Mol Syst Biol . 2009;5:330.
52. Kobayashi K, Ehrlich SD, Albertini A, et al. Essential Bacillus subtilis genes .Proc Natl Acad Sci USA .
2003;100:4678
242
4683.
53. Tsuge K, Matsui K, Itaya M. One step assembly of multiple DNA fragments with designed order and
orientation in Bacillus subtilis plasmid. Nucleic Acids Res . 2003;31(21):e133.
54. Tsuge K, Matsui K, Itaya M. Production of the non-ribosomal peptide plipastatin in Bacillus subtilis regulated by
3 relevant gene blocks assembled in a single movable DNA segment. J Biotechnol . 2007;129:592 603.
55. Itaya M. Genetic transfer of large DNA inserts to designated loci of the Bacillus subtilis 168 genome. J Bacteriol .
1999;181:1045 1048.
56. Itaya M, Kawata Y, Sato M, et al. A simple method to provide a shuttling plasmid for delivery to other host
ascertained by prolonged stability of extracellular plasmid DNA (excpDNA) released from Escherichia coli K12
endA mutant, deficient in major endonuclease. J Biochem .2012;152(6):501 504.
57. Kuroki A, Ohtani N, Tsuge K, Tomita M, Itaya M. Conjugational transfer system to shuttle giant DNA cloned
by the Bacillus subtilis genome (BGM) vector. Gene . 2007;399:72 80.
58. Keller M, Zengler K. Tapping into microbial diversity. Nat Rev Microbiol . 2004;2:141 150.
59. http://dels-old.nas.edu/metagenomics/overview.shtml
60. Wooley JC, Godzik A, Friedberg I. A primer on metagenomics. PLoS Comput Biol . 2010;6:e1000667.
61. Zhu L, Zhu Y, Zhang Y, Li Y. Engineering the robustness of industrial microbes through synthetic biology.
TIMS . 2012;20:94
101.
62. Ray JC, Tabor JJ, Igoshin OA. Non-transcriptional regulatory processes shape transcriptional network dynamics.
Nat Rev Microbiol . 2011;9:817
828.
63.
Isaacs FJ, Carr PA, Wang HH, et al. Precise manipulation of chromosomes in vivo enables genome-wide codon
replacement. Science . 2011;333(6040):348
353.
64. Blount ZD, Barrick JE, Davidson CJ, Lenski RE. Genomic analysis of a key innovation in an experimental
Escherichia coli population. Nature . 2012;489(7417):513
518:27
65. Dymond JS, Richardson SM, Coombes CE, et al. Synthetic chromosome arms function in yeast and generate
phenotypic diversity by design. Nature . 2011;477(7365):471
476.
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