Biomedical Engineering Reference
In-Depth Information
Conservative force
.
This is the repulsive potential force acting between particles
i and j.
n
a
1
r
c
r
ij
r
ij
r
ij
r
c
O
F
ij
.r
ij
/ D
(7.19)
0
r
ij
>r
c
Here a denotes the repulsive force coefficient corresponding to the maximum of
this force at distance r
ij
D r
c
.
Dissipative force
.
Represents the friction force approximated by
F
ij
.r
ij
/ D
w
D
.r
ij
/.
r
ij
v
ij
/
O
r
ij
O
(7.20)
where is the friction coefficient and
w
D
stands for the dissipative force
amplitude weight function
n
1
r
c
2k
r
ij
r
ij
r
c
w
D
.r
ij
/ D
(7.21)
0
r
ij
>r
c
The exponentk D 1=2 is used in the standard DPD method, however other values
are possible (e.g., k D 0:25 see [
222
]) to modify the diffusivity of the method.
Random force
.
Based on the Brownian motion of particles, the random forces can
be expressed as
F
ij
.r
ij
/ D
w
R
.r
ij
/
ij
dt
1=2
r
ij
;
O
(7.22)
where
ij
is a random variable with normal distribution, zero mean, and unit
variance satisfying the symmetry
ij
D
ji
. The random force coefficient is
linked to friction coefficient an
d absolu
te temperature T via the Boltzmann
constant k
B
by the relation D
p
2k
B
T . The random force weight function is
in this case given by
n
1
r
c
k
r
ij
r
ij
r
c
w
R
.r
ij
/ D
(7.23)
0
r
ij
>r
c
The random and dissipative forces form must satisfy the fluctuation-dissipation
theorem so that the DPD model preserves the equilibrium temperature. This leads
to the condition
w
D
D
w
R
which is satisfied in the above case. Parametrization for
external forces F
i
as well as for various additional structural (bonding, torsion,
adhesion, etc.) forces can be found in specialized literature.
The DPD method has been successfully used for simulations of blood coagula-
tion related phenomena. For details on the implementation of the DPD model of
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