Biomedical Engineering Reference
In-Depth Information
Table 1.1 Overview of Rab-GEFs, their sites of localization and their localization mechanism
GEF
Rab
Localization
Localizer(s)
TRAPP (Cai et al. 2007 ; Wang
et al. 2000 )
Rab1
ER-Golgi
Sec23 (CopII)
Ric1/Rgp1 (Pusapati et al. 2012 )
Rab6
Golgi, cytosol
Rab33b:GTP
Sec2 (Ortiz et al. 2002 ; Walch-
Solimena et al. 1997 )
Sec4
Secretory vesicles Ypt32:GTP, Sec15
(exocyst)
Rabin8 (Chiba et al. 2013 ; Hattula
et al. 2002 ; Knodler et al. 2010 )
Rab8
Cilia, cortical actin Rab11:GTP, Sec15
(exocyst),
Phosphatidylserine
Rabex5 (Horiuchi et al. 1997 )
Rab5
Early endosomes
Rabaptin5,
ubiquitinylation
DrrA/SidM (Brombacher et al. 2009 ;
Machner and Isberg 2007 ; Murata
et al. 2006 )
Rab1
Legionella
containing vac-
uole/plasma
membrane
PI(4)P
Mon1/Ccz1 (Lachmann et al. 2012 ;
Nordmann et al. 2010 )
Ypt7/Rab7 Late endosomes
Vps21(Rab5):GTP
DENND1A (Allaire et al. 2010 ;
Yoshimura et al. 2010 )
Rab35
Clathrin coated
pits, (plasma
membrane)
AP2
DENND5A/5B (Miserey-Lenkei
et al. 2007 ; Recacha et al. 2009 ;
Yoshimura et al. 2010 )
Rab39
Golgi
Rab6:GTP
DENND2 (Yoshimura et al. 2010 )
Rab9
Actin filaments
lysosomal
trafficking
MADD/Rab3Gep (Figueiredo
et al. 2008 ; Yoshimura et al. 2010 )
Rab27
Melanosomes
Bloc-3 (Gerondopoulos et al. 2012 )
Rab32/38 Melanosomes
Crag (Xiong et al. 2012 )
Rab11
Rhabdomeres
FAM116 (Linford et al. 2012 )
Rab14
Recycling
endosomes,
cytosol
MTMR5/13 (Yoshimura et al. 2010 ) Rab28
DENND1C (Yoshimura et al. 2010 ) Rab13
DENND3 (Yoshimura et al. 2010 ) Rab12
DENND1B (Yoshimura et al. 2010 ) Rab35
In the case of recently discovered GEFs, this information is incomplete or absent
1.5 Do Additional Factors Contribute to Rab Targeting?
Although the evidence described is strong support for a decisive role of GEFs in
Rab targeting, over the years other factors have been suggested to play an important
part. The original hypothesis that the hypervariable C-terminal region alone acted
as the sole determining factor (Chavrier et al. 1991 ) has been challenged and at least
partially disproved, suggesting that multiple regions in Rabs contribute to mem-
brane targeting (Ali et al. 2004 ). However, further testing of the role of the
 
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