Agriculture Reference
In-Depth Information
-710 AGGTGTCATTTTCAAATACATCT CACATG CATTTCTAATGCTCATAGAGG TCATTACTAA TCTCTTCTAA
-640 TCTTATATTTTATGGCCCATTTCTTACTAACTTTAACTCAATTCTTTGTGACTTAGGATATCATCTAACA
-570 TAGCCTCAATATGCGCTTCGGACGAGCAATTTCAAGACTCATGCAAATTCTTCGATTA CAAGTG GGCAAA
-500 GTACAATGTTACAGATTGCATTATTAACCAATCAAAGTGGATCATTTACTAGTTGTATA TATATAAT TTA
-430 GGTTTATGAAGCCAAGCATTACTCCAAACAAACAATATTCAAATATAATTTCCTT TGAC GTGTGCAAATT
-360 CCGGGCCGACTTAATTATTAGGAGTTCATTGACTTAGTTAATACTTGGTTGTCCCTAAGATGCAAGA CAG
-290 TTG TTAAT TAAC CAGCTG ATTGCAATTTTGAAGGGTTACTGTGATCCCTTGGGATATTCGATGAGACTTT
-220 TACTATTCATATCATCGTATGCGGCGAACTGGATCACA CAAATGT GGAGAATCTTACTCTTGCCCGTTGC
-150 CCCTTCACAACCCTCCACAAC GTCAAC T CCAAGCCC TATATAAAT CCCACACTCCCTTTGTACCTTCCTC
-80 ACACAACACTACAATTCCGTTTAGTACTCTAATCAGCATCAAAATCCAAACCCCAAACCCCGAATTCCGA
-10 AGCCCCAAAA atg
A
B
-710 TTAACATTCTTCTCTGAAAAATAAATAAAAGGTGTTTGTTTTAAAGTTAGAGAATCATTTTTTGTAGACT
-640 TGCAGTGCTTCTCTACGTAACACTGTGTGTGTTCTTTTTTGATGAGATAGGGGGGACAAAACCCAAAAGA
-570 GAACTGTGTGTGTTCTTTATGAAGTCTTCTCTTGATAAAAAGAGTTATTGAATGGAAGGGTTTGCTACAA
-500 AAACACTTGTTATTTTACTACAAAGTGTACAAAACAATAAATAAATAAAAGCTATATAAATCTGTATGTC
-430 ATAT CATCTGTAATACTCTAACCATTTTACAGTGGTCCATGGAACGTGCAATGTGTACAAATCCCAA GCC
-360 GAG T TCATTAGGGTTCAT TGAC TTAATTAATTTTTGATTATCCTAATTATATGCGGCTAC CAGTTAGTTA
-290 AC CAGCTG GATGGCCCATTAGGGAAGGTTTATGTGATCCCTTGGGATATACGATGAGACTTTTCCTGTTC
-220 ACATAAGATGCGGCAAAATGGATAACAAAAGTGTTGAGAATCTTTCCTTGCCTCTTCATAACCCTTCACA
-150 CAAT GTCAAC T CCAAGCCC TATATAAAT GCCACACTCCCATATACTTTCCCCACACAACCCTAGAACTTC
-80 ATTTAGTCTAAGTAGTTTCTAAATTCGAAACTCGAGTTTTGAAACTCGAGATTCAAAATCCAAACTCCAA
-10 ACCCCAAATA atg
-710 CAATCTTCCTAAGCATAATTAGGGATCTGATTACATCATCACAACTTTAGTTTAATAAGTGAAAATCTAT
-640 ATATTATTTTGTTTATTTCAATAACATTCTATTATATTAACAAAAAAAAAAAAAAAATCAAATGGAACCT
-570 TTGAATCCATGCAAAGACATAGTCACATAGAGAGAGAGAGGACCCACCGCGTT CACATG TATGAATATGG
-500 ATTGATAGTAAACTCTATGAGGATTTGCTGTATTAGACATGAAAAGAAATCGTTGTAAACAGAACCAGAA
-430 AGTAGTTTCTCGTTTGAGAAAAAAAAAAAAAAAAAAAACTTCCTAGATATATGGACAGTTTAG TAATATT
-360 ATAT TGTTGATAAATACTAAATTGGAATATAAGTGAAAGTGAACCTTTGGG ACGT A TGAC CAGGCTAAAT
-290 TCTCGTGTTTGCATGCTCGCGGCGAAAGTGAATATTCCATACTATTAATATAAAGACACAACTTGTATAA
-220 TTGTAATCAATCTCACATAAACAACTTTGAATCATTAATTATCGTTAAGAACTATACTATTATAGTATCA
-150 TTTACGTAAAACGAATCCCACTTATAGCCTTTTCGAATCTCCATCGGCTCTTACGAA GTCAACT TTCGTA
-80 TCTC TATATAAAA CCATTCTTCTCCTTCTTGTTCCCTAAACCAAGACCACAAGAAAAAAACATAAAAAAA
-10 TATTCACAAA atg
C
Figure 5. Figure 5. Comparison of NRT2.4 promoter regions from apple and Arabidopsis. Only the first 700 bases up‐
stream of the translation start ( atg ) are shown. Cis -elements were identified by PLACE [88] and PLANTCare [89]. A:
Promoter region from apple MdNRT2.4; B: Promoter region from peach genome; C: Promoter region from Arabidopsis
AtNRT2.4. AAACAAA: anaerobic induction [90]; TGACG: WRKY stress responsive binding element [91]; A A / C GTCA
and G / A GACTTTTC: bZIP and NF-B binding sites, respectively [92]; CAAGCATGCTTCTTGC: consensus root-spscific ele‐
ment [93]; TATA box: PolII binding; TCATTACTAA: wound-inducible element [94]; ACGTG/AT: ABRE core element
[95]. An element of unknown function in the Arabidopsis NRT2.4 gene promoter ( GTCAACT ) is also present in the
MdNRT2.4 and peach promoters. A cis -element for hypoosmolarity-responsiveness [96] is identified by an oval. Dash‐
ed underlines indicate a MYB (WAACCA) binding site [97] and MYC core sequences (CANNTG); fuschia-underlined
MYC element on the negative strand in A and B (CAACTG) is associated with drought response [73]. A CBF/DREB ele‐
ment [98, 99] is boxed in A and B.
largest stomates, whereas GMAL3684.a had the smallest. GMAL3689.n had the highest density
of stomates (58 per 0.09 mm 2 ); GMAL3685.e had the lowest density (23 per 0.09 mm 2 ). There
was no correlation between leaf and stomate features in the M. sieversii site 6 population, nor
was there a correlation between the leaf and stomate extreme values and the 13 C extreme values.
 
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